BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014C06LP1|AL426660
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig947 1004 0.0
3x_Contig465 190 3e-48
>3x_Contig947
Length = 3468
Score = 1004 bits (506), Expect = 0.0
Identities = 506/506 (100%)
Strand = Plus / Plus
Query: 299 attgaacgaaaagctttgtagtggttattttaagataattttcggggttttcacagaaaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 attgaacgaaaagctttgtagtggttattttaagataattttcggggttttcacagaaaa 80
Query: 359 ttccagtggtatgtcgttccttgagaaatggaatgtattcactgtcatcaacaacatgtt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ttccagtggtatgtcgttccttgagaaatggaatgtattcactgtcatcaacaacatgtt 140
Query: 419 ttcgaagaaatctagcatttctatcaaatatctaatgttagcacttccggaattgaactt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttcgaagaaatctagcatttctatcaaatatctaatgttagcacttccggaattgaactt 200
Query: 479 ccgattttcaagatgtaagatgttcctaaacaaggccctactagatgatagggaagccat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgattttcaagatgtaagatgttcctaaacaaggccctactagatgatagggaagccat 260
Query: 539 taggattttggcaacagagacattaggagagaaattacagagtttagaagaagatgaggt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggattttggcaacagagacattaggagagaaattacagagtttagaagaagatgaggt 320
Query: 599 taaactagaggcgtattttattcaactgacttgtaggcaattgtatgatttggctccgac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaactagaggcgtattttattcaactgacttgtaggcaattgtatgatttggctccgac 380
Query: 659 cgttgttgccattgcggataaaatattgtacgattattgttctacgaacgtacatccaac 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgttgttgccattgcggataaaatattgtacgattattgttctacgaacgtacatccaac 440
Query: 719 taagattctccaatcttctataaaaaactgcctagaccagttaatatttatcggttcccc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagattctccaatcttctataaaaaactgcctagaccagttaatatttatcggttcccc 500
Query: 779 aactttgttaaaacttatggaaacaa 804
||||||||||||||||||||||||||
Sbjct: 501 aactttgttaaaacttatggaaacaa 526
>3x_Contig465
Length = 2281
Score = 190 bits (96), Expect = 3e-48
Identities = 98/99 (98%)
Strand = Plus / Minus
Query: 1 agagtncattgatgaacaaaaagagactagatgaattagcaaaaagcactagattcgttc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 agagtccattgatgaacaaaaagagactagatgaattagcaaaaagcactagattcgttc 40
Query: 61 gtagaatgttggtgttctatcgtccttttcgatttagat 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 gtagaatgttggtgttctatcgtccttttcgatttagat 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6082
Number of Sequences: 1807
Number of extensions: 6082
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 2
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)